The 2JZGE igniters are probably the exact same thing (PN's???) internally as the 1UZ igniters. Do they plug right in???
They work because you probably don't have your secondary O2 sensors plugged in or the transistors in the ECU haven't acted up or broken down yet.
On the 1100/1101 EMS's, the coil outputs are on pins 52B through 57B, paired together internally so that the 2jzgte can be run wastedspark using only three coil outputs of the EMS. On the 2jzgte, all six of the pins are used and on the 2jzge only one of them are used, but on the early 1UZ's 4 of them are used. Two of them are for the coils and two are used for the heaters on the secondary O2 sensors, pins 52B & 53B.
With the secondary O2 sensors plugged in, there will be battery voltage (~12V-14V) at those two pins of EMS which are connected to the transistors (NPN) inside. Applying that voltage to that transistor terminal (Emitter) while sometimes having 0V at another transistor terminal (Base) exceeds the maximum rated voltage of the transistor and could lead to it's failure.
If either of those two transistors on pins 52B & 53B fail, it could effect the transistors they're paired up with, which are the ones that trigger the two igniters on a 1UZ. This could cause ignition misfires and/or possibly no ignition at all. I decided to remove mine so that there's no chance of that happening and possibly leave me stranded somewhere. At the very least, the transistors would be damaged and the ECU might not fire the coils correctly if it were put on a 2jzgte.
So, I recommend either leaving your secondary O2's disconnected or remove the transistors from the ECU.